Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EES64972.1Putative NADH oxidase. (541 aa)    
Predicted Functional Partners:
asrC
Sulfite reductase, subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
      0.669
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
  0.619
EES62596.1
Rubredoxin.
 
   
0.589
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
  0.551
EES64336.1
Metallo-beta-lactamase domain protein.
   
 0.548
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
 0.533
EES62558.1
Rubredoxin.
  
 
 0.523
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.521
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
  0.521
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
  0.487
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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