Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EES65018.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. (463 aa)    
Predicted Functional Partners:
phoP-3
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 
 0.943
resD
Transcriptional regulatory protein ResD.
 
 
 0.816
EES64701.2
Response regulator receiver domain protein.
 
 
 0.810
EES64117.1
Putative transcriptional regulatory protein ResD.
 
 
 0.810
EES65184.1
Putative transcriptional regulatory protein ResD.
 
 
 0.809
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 
 0.807
EES64937.1
Putative transcriptional regulatory protein WalR.
 
 
 0.805
arlR
Response regulator ArlR.
 
 
 0.799
phoP-2
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 
 0.796
EES64702.1
Response regulator receiver domain protein.
 
 
 0.783
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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