Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EES64234.1Oxidoreductase, short chain dehydrogenase/reductase family protein. (246 aa)    
Predicted Functional Partners:
EES63822.1
Transporter, major facilitator family protein.
  
 
 0.774
EES64233.2
Hypothetical protein.
       0.605
hdhA
7-alpha-hydroxysteroid dehydrogenase.
 
 0.600
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 
 0.550
EES64232.1
Aminotransferase, class I/II.
       0.525
kduD
2-deoxy-D-gluconate 3-dehydrogenase.
  
 0.448
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.448
EES64235.1
MATE efflux family protein.
       0.439
EES64243.1
Hypothetical protein.
    
 0.401
EES63633.1
Quinone oxidoreductase, YhdH/YhfP family.
    
 0.401
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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