Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EES64245.1beta-alanyl-CoA:ammonia lyase. (127 aa)    
Predicted Functional Partners:
EES64244.1
Hypothetical protein.
  
 0.996
EES63428.1
Hypothetical protein.
  
 0.973
EES62357.2
Hypothetical protein.
  
 0.961
EES64243.1
Hypothetical protein.
 
   
 0.912
EES64239.1
D-Lysine 5,6-aminomutase alpha subunit.
 
  
 0.840
EES64238.1
B12 binding domain protein.
 
   
 0.822
EES64241.1
Hypothetical protein.
 
     0.803
MutS
MutS domain V protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
    0.722
EES63754.2
Hypothetical protein.
   
 0.512
EES63822.1
Transporter, major facilitator family protein.
  
  
 0.446
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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