Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EES64355.1ABC transporter, substrate-binding protein, family 5. (506 aa)    
Predicted Functional Partners:
dppC
Dipeptide ABC transporter, permease protein DppC.
 
 0.851
gsiC
Glutathione ABC transporter, permease protein GsiC.
 
 
 0.851
EES63700.1
Putative dipeptide ABC transporter, permease protein DppC.
 
 0.827
EES64180.1
Putative oligopeptide ABC transporter, permease protein AppC.
 
 0.827
EES64179.1
ABC transporter, permease protein.
 
 
 0.805
EES63699.1
Putative nickel transport system permease protein NikB.
 
 
 0.804
EES64178.1
ABC transporter, substrate-binding protein, family 5.
  
  
 
0.783
EES62744.1
ABC transporter, substrate-binding protein, family 5.
  
  
 
0.737
EES62402.1
ABC transporter, substrate-binding protein, QAT family.
   
 
 0.733
nifJ
Pyruvate synthase.
  
    0.705
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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