Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EES62402.1 | EES64474.1 | FVAG_00091 | FVAG_01965 | ABC transporter, substrate-binding protein, QAT family. | Transcriptional regulator, MarR family. | 0.463 |
EES63963.1 | EES64474.1 | FVAG_02431 | FVAG_01965 | Diguanylate cyclase (GGDEF) domain protein. | Transcriptional regulator, MarR family. | 0.483 |
EES64473.1 | EES64474.1 | FVAG_01964 | FVAG_01965 | MATE efflux family protein. | Transcriptional regulator, MarR family. | 0.655 |
EES64473.1 | EES64475.1 | FVAG_01964 | FVAG_01966 | MATE efflux family protein. | Hypothetical protein. | 0.423 |
EES64473.1 | pepT | FVAG_01964 | FVAG_01963 | MATE efflux family protein. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.558 |
EES64474.1 | EES62402.1 | FVAG_01965 | FVAG_00091 | Transcriptional regulator, MarR family. | ABC transporter, substrate-binding protein, QAT family. | 0.463 |
EES64474.1 | EES63963.1 | FVAG_01965 | FVAG_02431 | Transcriptional regulator, MarR family. | Diguanylate cyclase (GGDEF) domain protein. | 0.483 |
EES64474.1 | EES64473.1 | FVAG_01965 | FVAG_01964 | Transcriptional regulator, MarR family. | MATE efflux family protein. | 0.655 |
EES64474.1 | EES64475.1 | FVAG_01965 | FVAG_01966 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.495 |
EES64474.1 | pepT | FVAG_01965 | FVAG_01963 | Transcriptional regulator, MarR family. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.554 |
EES64475.1 | EES64473.1 | FVAG_01966 | FVAG_01964 | Hypothetical protein. | MATE efflux family protein. | 0.423 |
EES64475.1 | EES64474.1 | FVAG_01966 | FVAG_01965 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.495 |
pepT | EES64473.1 | FVAG_01963 | FVAG_01964 | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | MATE efflux family protein. | 0.558 |
pepT | EES64474.1 | FVAG_01963 | FVAG_01965 | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Transcriptional regulator, MarR family. | 0.554 |