STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES65123.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
rfbG
CDP-glucose 4,6-dehydratase.
 
 
 0.988
rfbF
Glucose-1-phosphate cytidylyltransferase.
 
  
 0.879
EES65124.1
Glycosyltransferase, group 2 family protein.
 
  
 0.768
EES65119.1
NAD dependent epimerase/dehydratase family protein.
 
  
 0.681
EES65120.2
Hypothetical protein.
 
  
 0.625
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.552
EES62908.1
NAD dependent epimerase/dehydratase family protein.
  
  
 0.545
EES62682.1
WxcM-like protein.
 
  
 0.499
EES65118.1
Putative acetolactate synthase large subunit; Belongs to the TPP enzyme family.
     
 0.488
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.