STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EES65141.1GHMP kinase, N-terminal domain protein. (343 aa)    
Predicted Functional Partners:
EES65140.2
DnaA initiator-associating protein DiaA family protein.
 
  
 0.916
EES65322.1
Putative D,D-heptose 1,7-bisphosphate phosphatase.
 
  
 0.864
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
  
 0.860
EES65139.1
Nucleotidyl transferase.
 
  
 0.844
EES65142.1
Glycosyltransferase, group 1 family protein.
 
    0.826
EES65144.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
       0.782
EES65143.2
Glycosyltransferase, group 2 family protein.
       0.773
EES62908.1
NAD dependent epimerase/dehydratase family protein.
  
  
 0.767
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.500
TuaD
Nucleotide sugar dehydrogenase.
  
  
 0.437
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.