Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
csoS1A-2Major carboxysome shell protein 1A. (94 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 0.941
EES62815.1
Putative carbon dioxide concentrating mechanism protein CcmL.
 
 
 0.875
EES63687.1
BMC domain protein.
 
     0.803
EES63685.1
BMC domain protein.
 
    
0.765
eutL
Ethanolamine utilization protein EutL.
  
  
 0.750
eutC
Ethanolamine ammonia-lyase, light subunit; Belongs to the EutC family.
  
  
 0.729
eutB
Ethanolamine ammonia-lyase, large subunit.
  
  
 0.718
EutS
BMC domain protein.
 
  
 0.692
EES63690.2
Propanediol utilization protein PduL; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.685
EES63681.2
Ethanolamine utilization protein EutA.
  
  
 0.671
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.