Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63716.1Periplasmic binding protein. (297 aa)    
Predicted Functional Partners:
EES63717.1
Periplasmic binding protein.
 
    
0.737
EES64506.2
Periplasmic binding protein.
  
     0.712
EES62402.1
ABC transporter, substrate-binding protein, QAT family.
     
 0.696
EES63200.1
Putative flagellar protein FliS.
  
     0.652
EES63725.1
ABC transporter, ATP-binding protein.
 
   0.652
EES63724.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   0.639
EES63198.1
Putative corrinoid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   0.609
EES63193.1
Putative corrinoid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   0.606
EES63708.1
Periplasmic binding protein.
  
     0.605
EES63718.1
Putative cobaltochelatase, CobN subunit.
  
    0.585
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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