Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EES63748.2AP endonuclease, family 2. (308 aa)    
Predicted Functional Partners:
EES63749.1
Oxidoreductase, NAD-binding domain protein.
 
  
 0.909
EES63747.1
Putative ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.747
alsA
AlsA ABC superfamily (atp_bind), allose transport protein (second module).
 
    0.737
EES63745.1
Hypothetical protein.
 
    0.696
EES63744.1
Transcriptional regulator, LacI family.
 
  
 0.584
EES62921.1
Oxidoreductase, NAD-binding domain protein.
 
  
 0.432
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.408
EES63751.1
Hypothetical protein.
       0.408
rpmA
Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.408
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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