Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63768.1PTS system fructose IIA component. (134 aa)    
Predicted Functional Partners:
EES63766.1
PTS system sorbose-specific iic component.
 
 
 0.984
EES63767.1
PTS system mannose/fructose/sorbose family IID component.
 
 
 0.984
EES63765.1
PTS system sorbose subfamily IIB component.
 
  
 0.975
EES62389.1
PTS system sorbose-specific iic component; Overlaps another CDS with the same product name.
 
 
 0.935
EES62390.2
PTS system, mannose/fructose/sorbose family, IID component; Overlaps another CDS with the same product name.
 
 
 0.933
EES62388.1
PTS system sorbose subfamily IIB component.
 
  
 0.923
EES63769.1
Arylsulfatase.
       0.705
EES64204.1
Sugar isomerase, AgaS family.
 
  
 0.670
EES62392.1
SIS domain protein.
 
  
 0.546
fruA
PTS system fructose-specific EIIABC component.
  
  
 0.530
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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