STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EES63968.1Filamentous hemeagglutinin family domain protein. (3079 aa)    
Predicted Functional Partners:
EES63967.1
POTRA domain protein, ShlB-type.
 
 
 0.948
EGR54250.1
Hypothetical protein.
 
 
 0.849
EES63786.1
POTRA domain protein, ShlB-type.
 
 
 0.832
EES63969.2
Hypothetical protein.
       0.773
EES63627.1
Outer membrane autotransporter barrel domain protein.
 
  
 0.643
EES63272.2
Hypothetical protein.
  
     0.623
EES64564.1
Outer membrane autotransporter barrel domain protein.
 
  
 0.623
EES63326.1
Outer membrane efflux protein.
  
   
 0.609
EGR54228.1
Autotransporter beta-domain protein.
 
    0.608
EES63068.1
Autotransporter beta-domain protein.
  
     0.605
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.