Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63974.2Response regulator receiver domain protein. (267 aa)    
Predicted Functional Partners:
EES63975.2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
     0.950
EES63615.1
LytS/YhcK-type transmembrane receptor domain protein.
 
     0.638
nhaC-4
Na+/H+ antiporter NhaC.
 
     0.589
EES63326.1
Outer membrane efflux protein.
  
     0.530
EES64277.1
AP endonuclease, family 2.
  
     0.512
EES63972.1
Hypothetical protein.
       0.488
EES63272.2
Hypothetical protein.
  
     0.467
EES63267.1
Hypothetical protein.
  
     0.457
EES63902.1
Hypothetical protein.
  
     0.449
EGR54250.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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