Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64044.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
EES64045.2
Heptosyltransferase.
 
     0.850
EES62630.1
Hypothetical protein; Belongs to the UPF0265 family.
  
     0.773
EES63235.1
MltA-interacting protein MipA.
 
     0.750
EES63019.2
TonB family domain protein.
  
     0.743
EES65065.1
Outer membrane autotransporter barrel domain protein.
  
     0.707
EGR54168.1
Hypothetical protein.
       0.686
EES63443.1
MltA-interacting protein MipA.
 
     0.675
EES63454.2
PHP domain protein.
  
     0.618
EES63131.1
Outer membrane autotransporter barrel domain protein.
  
     0.614
EES62661.1
Heptosyltransferase.
 
     0.550
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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