Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64079.1Hypothetical protein. (578 aa)    
Predicted Functional Partners:
EES64077.1
Hypothetical protein.
       0.773
EES64078.1
Hypothetical protein.
       0.773
EES64080.1
Hypothetical protein.
       0.762
EES64081.1
Hypothetical protein.
     
 0.752
EES64082.2
Hypothetical protein.
       0.652
EES64076.2
Hypothetical protein.
       0.636
EES64083.2
Hypothetical protein.
       0.623
EES64075.2
Hypothetical protein.
       0.570
EES64074.1
Hypothetical protein.
       0.411
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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