Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64101.1Heptosyltransferase. (328 aa)    
Predicted Functional Partners:
EES64098.2
Heptosyltransferase; Overlaps another CDS with the same product name.
 
     0.941
EES64099.1
Heptosyltransferase; Overlaps another CDS with the same product name.
 
    
0.850
rfaY-3
Lipopolysaccharide core biosynthesis protein RfaY.
 
     0.846
EES64097.1
Glycosyltransferase, group 2 family protein.
 
  
 0.836
rfaE-2
Bifunctional protein RfaE, domain I.
 
   
 0.782
rfaE
Bifunctional protein RfaE, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
   
 0.781
EES62651.2
Heptosyltransferase.
  
     0.758
EES62661.1
Heptosyltransferase.
  
     0.744
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.738
EES62652.1
Hypothetical protein.
  
     0.725
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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