Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bcd-2butyryl-CoA dehydrogenase. (375 aa)    
Predicted Functional Partners:
etfB
Electron transfer flavoprotein subunit beta.
 
 
 0.966
etfA
Electron transfer flavoprotein subunit alpha.
 
 0.957
crt
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.956
hbd
3-hydroxybutyryl-CoA dehydrogenase.
 0.829
EES62558.1
Rubredoxin.
  
 
 0.806
EES63755.1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.785
EES64411.1
Putative acyl carrier protein.
  
 0.742
EES64413.1
Putative acyl carrier protein.
  
 0.742
nifJ
Pyruvate synthase.
  
 0.727
hymB
Protein HymB.
  
 0.688
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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