Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EES63871.1Putative D-cysteine desulfhydrase. (326 aa)    
Predicted Functional Partners:
EES63874.1
Putative hemolysin.
    
  0.924
EES64183.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
    
  0.907
malY
Maltose regulon modulator MalY.
    
  0.902
hly
Hemolysin.
    
  0.902
EES63034.1
Putative hemolysin.
    
  0.902
EES64214.1
Putative hemolysin.
    
  0.902
EES63872.1
Hypothetical protein.
       0.757
EES63870.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.624
EES63873.2
Sigma-54 interaction domain protein.
       0.447
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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