Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pcpPyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. (214 aa)    
Predicted Functional Partners:
EES63909.1
Hypothetical protein.
 
    0.925
EES63910.2
Hypothetical protein.
 
     0.916
EES65293.1
Hypothetical protein.
  
   0.770
EES63395.1
Tetratricopeptide repeat protein.
    
   0.743
EES63411.1
Hypothetical protein.
    
   0.743
EES63047.1
Hypothetical protein.
   
   0.740
EES63509.1
Hypothetical protein.
   
   0.740
EES62820.1
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.738
GlpF
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.738
EES62971.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.677
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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