Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63931.1Outer membrane autotransporter barrel domain protein. (1292 aa)    
Predicted Functional Partners:
EES63930.1
Hypothetical protein.
 
     0.708
EES62363.1
Exonuclease.
  
     0.577
EES64149.1
Hypothetical protein.
  
    0.561
EES63314.1
Mu transposase domain protein.
  
     0.537
EES63647.1
Hypothetical protein; Belongs to the tRNA pseudouridine synthase TruA family.
  
     0.477
EES63929.1
Hypothetical protein.
  
     0.469
EES62945.1
Hypothetical protein.
  
     0.447
EES62436.1
Ion channel.
 
     0.427
EES63232.1
Outer membrane efflux protein.
  
    0.401
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.