Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64155.1Acetyltransferase, GNAT family. (159 aa)    
Predicted Functional Partners:
EES64156.1
Tetratricopeptide repeat protein.
       0.762
EES64157.1
Tetratricopeptide repeat protein.
       0.762
EES64151.1
Hypothetical protein.
       0.513
EES64152.1
Hypothetical protein.
       0.513
EES64153.1
Hypothetical protein.
       0.513
EES64154.1
Hypothetical protein.
       0.513
EES62408.1
Acetyltransferase, GNAT family.
 
 
 0.480
EES64158.1
Hypothetical protein.
       0.477
EES64159.1
YhcH/YjgK/YiaL family protein.
       0.475
EES64150.1
Hypothetical protein.
       0.412
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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