Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGR54174.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
EES63836.2
Threonine ammonia-lyase domain protein.
 
     0.765
EES64289.1
Hypothetical protein.
  
    0.577
EES64288.2
VacJ-like protein.
       0.560
EES64287.1
Dipeptidase PepV.
  
  
 0.534
EES63606.2
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.491
EES64671.1
Chorismate mutase.
     
 0.448
nifJ
Pyruvate synthase.
  
  
 0.443
ilvE
Branched-chain-amino-acid transaminase.
  
 
 0.437
EES64286.1
Hypothetical protein.
       0.426
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.415
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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