STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV02477.1Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_00881 1.2e-87 4-alpha-glucanotransferase K00705; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.96. (423 aa)    
Predicted Functional Partners:
EDV02476.1
Glycosyl hydrolase, family 57; KEGG: pgi:PG1683 8.9e-108 hypothetical protein K07405; COG: COG1449 Alpha-amylase/alpha-mannosidase.
 
 
 0.978
EDV02478.1
Putative glycogen debranching enzyme, archaeal type; KEGG: ava:Ava_2025 3.4e-60 glycogen debranching enzyme K00705; COG: COG3408 Glycogen debranching enzyme.
 
 0.967
EDV00895.1
Alpha amylase, catalytic domain protein; KEGG: bth:BT0771 0. 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) K00700; COG: COG0296 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 8.96.
 0.900
glgP
KEGG: bfr:BF2726 0. alpha-glucan phosphorylase K00688; COG: COG0058 Glucan phosphorylase.
 
 0.760
EDU99189.1
Starch synthase; KEGG: sat:SYN_00879 3.2e-96 glycogen synthase/glycogen phosphorylase K00688:K00693; COG: COG0438 Glycosyltransferase.
  
  
 0.760
EDV02344.1
KEGG: neu:NE0093 4.8e-148 recQ; ATP-dependent DNA helicase K03654; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.742
EDV01474.1
Hypothetical protein; KEGG: cps:CPS_3511 0.0011 prolyl oligopeptidase family protein K01322; COG: COG1073 Hydrolases of the alpha/beta superfamily.
    
 
 0.693
EDV01475.1
Hypothetical protein; KEGG: eci:UTI89_C1599 7.1e-11 hypothetical protein YcjY; COG: COG1073 Hydrolases of the alpha/beta superfamily.
    
 
 0.693
EDV00421.1
Hypothetical protein; KEGG: bba:Bd1031 4.8e-06 putative phospholipase/carboxylesterase; COG: COG1073 Hydrolases of the alpha/beta superfamily.
    
 
 0.693
EDV00250.1
Alpha amylase, catalytic domain protein; KEGG: ava:Ava_4479 9.9e-30 glycoside hydrolase, family 13-like K00700; COG: COG0296 1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family.
   
 0.633
Your Current Organism:
Bacteroides coprocola
NCBI taxonomy Id: 470145
Other names: B. coprocola DSM 17136, Bacteroides coprocola DSM 17136, Bacteroides coprocola M16, Bacteroides coprocola str. DSM 17136, Bacteroides coprocola strain DSM 17136
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