STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV00762.1Sporulation and cell division repeat protein; COG: NOG19142 non supervised orthologous group. (154 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I; KEGG: bfs:BF3727 6.9e-85 folE, mtrA; GTP cyclohydrolase I K01495; COG: COG0302 GTP cyclohydrolase I; Psort location: Cytoplasmic, score: 8.96.
  
    0.852
EDU98973.1
Hypothetical protein; COG: NOG19149 non supervised orthologous group.
 
     0.735
EDV00399.1
Sporulation and cell division repeat protein; KEGG: bha:BH1294 0.0077 cwlC; N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase) K01448; COG: NOG14432 non supervised orthologous group.
  
     0.732
EDV02854.1
Hypothetical protein; COG: NOG25370 non supervised orthologous group.
  
     0.723
EDV02153.1
Hypothetical protein; COG: NOG26638 non supervised orthologous group.
  
     0.723
EDV00012.1
Hypothetical protein; COG: NOG07963 non supervised orthologous group.
  
     0.718
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.698
EDU99464.1
Hypothetical protein; COG: NOG19130 non supervised orthologous group.
  
     0.696
EDV00760.1
DoxX family protein; COG: NOG09952 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.670
EDU99075.1
Hypothetical protein; COG: NOG23407 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.661
Your Current Organism:
Bacteroides coprocola
NCBI taxonomy Id: 470145
Other names: B. coprocola DSM 17136, Bacteroides coprocola DSM 17136, Bacteroides coprocola M16, Bacteroides coprocola str. DSM 17136, Bacteroides coprocola strain DSM 17136
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