STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
psdPhosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (231 aa)    
Predicted Functional Partners:
EDV00303.1
Putative CDP-diacylglycerol-serine O-phosphatidyltransferase; KEGG: bth:BT2232 3.0e-68 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998; COG: COG1183 Phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.995
EDU98651.1
CDP-alcohol phosphatidyltransferase; KEGG: bth:BT1523 1.1e-72 CDP-diacylglycerol-inositol 3-phosphatidyltransferase K00995; COG: COG0558 Phosphatidylglycerophosphate synthase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.694
EDU98657.1
Hypothetical protein; KEGG: pfu:PF0462 4.9e-06 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; COG: NOG21347 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
   
 0.694
EDV00305.1
KEGG: bfr:BF0712 0. DNA polymerase III alpha subunit K02337; COG: COG0587 DNA polymerase III, alpha subunit; Psort location: Cytoplasmic, score: 9.97.
       0.675
EDV00302.1
Hypothetical protein.
       0.627
trxA-3
Thioredoxin; KEGG: hpa:HPAG1_0810 2.8e-24 thioredoxin K05905; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
       0.624
EDV00307.1
Hypothetical protein; COG: NOG19106 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
       0.602
EDV02245.1
Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 0.533
EDV00497.1
Phospholipase D domain protein; KEGG: bfs:BF3522 9.1e-138 putative phospholipid biosynthesis related protein K01005; COG: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
   
 0.533
EDU98805.1
SPFH/Band 7/PHB domain protein; KEGG: tpa:TP0114 2.0e-05 Lambda CII stability-governing protein (hflC) K04087; COG: COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
    
   0.461
Your Current Organism:
Bacteroides coprocola
NCBI taxonomy Id: 470145
Other names: B. coprocola DSM 17136, Bacteroides coprocola DSM 17136, Bacteroides coprocola M16, Bacteroides coprocola str. DSM 17136, Bacteroides coprocola strain DSM 17136
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