STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDU99974.1COG: COG4206 Outer membrane cobalamin receptor protein. (692 aa)    
Predicted Functional Partners:
EDU99978.1
Hypothetical protein; COG: NOG19102 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.948
EDU99973.1
Hypothetical protein; COG: NOG25284 non supervised orthologous group.
 
    0.940
EDU99975.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
  
 0.923
EDU99971.1
Trypsin and protease inhibitor; COG: NOG23387 non supervised orthologous group.
 
    0.921
EDU99972.1
Hypothetical protein; COG: NOG23386 non supervised orthologous group.
 
   0.917
EDU99977.1
KEGG: bth:BT1950 3.4e-131 Fe3+ ABC transporter, ATP-binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: Cytoplasmic, score: 9.12.
 
     0.855
EDU99970.1
Hypothetical protein; COG: NOG26801 non supervised orthologous group.
 
   
 0.838
EDU99976.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: stl:stu0406 0.0062 fructose PTS system component IIABC, truncated K02768:K02769:K02770; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.821
EDU99707.1
Hypothetical protein; COG: NOG29908 non supervised orthologous group.
  
   0.736
EDV01356.1
Hypothetical protein; COG: NOG24980 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.735
Your Current Organism:
Bacteroides coprocola
NCBI taxonomy Id: 470145
Other names: B. coprocola DSM 17136, Bacteroides coprocola DSM 17136, Bacteroides coprocola M16, Bacteroides coprocola str. DSM 17136, Bacteroides coprocola strain DSM 17136
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