STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDU99825.1PTS system Galactitol-specific IIC component; KEGG: sab:SAB0186 8.4e-80 phosphotransferase system galactitol-specific enzyme II, C component K02775; COG: COG3775 Phosphotransferase system, galactitol-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00. (461 aa)    
Predicted Functional Partners:
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
  
    0.768
EDV00588.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bfr:BF0072 2.5e-128 gluconate 5-dehydrogenase K00046; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.26.
  
 
  0.697
EDV00935.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: tte:TTE0069 6.3e-43 fabG2; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.26.
  
 
  0.680
EDV00926.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: rso:RSc0215 5.3e-78 RS00647; short chain dehydrogenase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 8.96.
  
 
  0.671
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.671
EDU98683.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: dme:Dmel_CG2070 6.2e-36 CG2070 K00100; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.671
EDU99824.1
Glycosyl hydrolase, family 88; KEGG: sus:Acid_1249 7.7e-54 pectinesterase K01051; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins; Psort location: Extracellular, score: 9.72.
  
    0.644
EDV02282.1
GroES-like protein; KEGG: bfs:BF1277 4.2e-156 putative zinc-binding alcohol dehydrogenase K00100; COG: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.555
EDV02848.1
KDPG and KHG aldolase; KEGG: bth:BT0489 2.5e-110 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625:K01650; COG: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; Psort location: Cytoplasmic, score: 9.26.
 
    0.536
EDV02614.1
Arylsulfatase; KEGG: rba:RB6781 3.8e-45 choline sulfatase K01133; COG: COG3119 Arylsulfatase A and related enzymes.
   
    0.465
Your Current Organism:
Bacteroides coprocola
NCBI taxonomy Id: 470145
Other names: B. coprocola DSM 17136, Bacteroides coprocola DSM 17136, Bacteroides coprocola M16, Bacteroides coprocola str. DSM 17136, Bacteroides coprocola strain DSM 17136
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