Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG41368.1 | SDG41382.1 | SAMN04488027_101191 | SAMN04488027_101192 | Protein of unknown function. | Dihydroorotase. | 0.800 |
SDG41368.1 | SDG41407.1 | SAMN04488027_101191 | SAMN04488027_101193 | Protein of unknown function. | Dolichol-phosphate mannosyltransferase. | 0.826 |
SDG41382.1 | SDG41368.1 | SAMN04488027_101192 | SAMN04488027_101191 | Dihydroorotase. | Protein of unknown function. | 0.800 |
SDG41382.1 | SDG41407.1 | SAMN04488027_101192 | SAMN04488027_101193 | Dihydroorotase. | Dolichol-phosphate mannosyltransferase. | 0.800 |
SDG41382.1 | SDG55179.1 | SAMN04488027_101192 | SAMN04488027_103101 | Dihydroorotase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.792 |
SDG41382.1 | SDG62957.1 | SAMN04488027_101192 | SAMN04488027_104132 | Dihydroorotase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.792 |
SDG41382.1 | SDG86987.1 | SAMN04488027_101192 | SAMN04488027_10994 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit. | 0.977 |
SDG41382.1 | SDG87349.1 | SAMN04488027_101192 | SAMN04488027_109114 | Dihydroorotase. | Dihydroorotase. | 0.758 |
SDG41382.1 | carA | SAMN04488027_101192 | SAMN04488027_101257 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.974 |
SDG41382.1 | pyrB | SAMN04488027_101192 | SAMN04488027_103102 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SDG41382.1 | pyrD | SAMN04488027_101192 | SAMN04488027_105103 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.949 |
SDG41382.1 | pyrE | SAMN04488027_101192 | SAMN04488027_106109 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.797 |
SDG41407.1 | SDG41368.1 | SAMN04488027_101193 | SAMN04488027_101191 | Dolichol-phosphate mannosyltransferase. | Protein of unknown function. | 0.826 |
SDG41407.1 | SDG41382.1 | SAMN04488027_101193 | SAMN04488027_101192 | Dolichol-phosphate mannosyltransferase. | Dihydroorotase. | 0.800 |
SDG55179.1 | SDG41382.1 | SAMN04488027_103101 | SAMN04488027_101192 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.792 |
SDG55179.1 | SDG62957.1 | SAMN04488027_103101 | SAMN04488027_104132 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.973 |
SDG55179.1 | SDG86987.1 | SAMN04488027_103101 | SAMN04488027_10994 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit. | 0.757 |
SDG55179.1 | SDG87349.1 | SAMN04488027_103101 | SAMN04488027_109114 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.921 |
SDG55179.1 | carA | SAMN04488027_103101 | SAMN04488027_101257 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.699 |
SDG55179.1 | pyrB | SAMN04488027_103101 | SAMN04488027_103102 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.992 |
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