STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG41983.1Hypothetical protein. (550 aa)    
Predicted Functional Partners:
SDG89066.1
Hypothetical protein.
  
     0.774
SDG93517.1
Hypothetical protein.
  
     0.774
SDG74824.1
Autotransporter translocation and assembly factor TamB.
  
 
 0.772
SDG98440.1
Family of unknown function.
  
 
 0.772
SDG90708.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.770
SDH02111.1
Hypothetical protein.
  
     0.769
SDG79892.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.768
SDG69202.1
Hypothetical protein.
  
     0.745
SDG45702.1
Exosortase family protein XrtF.
  
     0.709
SDG45723.1
Exosortase F-associated protein.
  
     0.704
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.