STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG42774.1Protein involved in gliding motility GldK. (463 aa)    
Predicted Functional Partners:
SDG42791.1
Protein involved in gliding motility GldL.
 
   
 0.962
SDG42810.1
Protein involved in gliding motility GldM.
 
   
 0.943
SDG42828.1
Protein involved in gliding motility GldN.
 
   
 0.926
SDH05028.1
Protein involved in gliding motility GldD.
  
   
 0.839
SDG48842.1
Protein involved in gliding motility SprA.
  
   
 0.837
SDG42759.1
Hypothetical protein.
 
     0.793
SDG57927.1
Probable protein-translocating porin PorT.
 
   
 0.790
SDG68910.1
Protein involved in gliding motility GldB.
  
   
 0.785
SDH05260.1
Protein involved in gliding motility GldH.
  
   
 0.784
SDG90986.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
   
   0.692
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.