Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG38395.1 | SDG38415.1 | SAMN04488027_10136 | SAMN04488027_10137 | Putative hemolysin. | Histidine triad (HIT) family protein. | 0.753 |
SDG38395.1 | SDG38438.1 | SAMN04488027_10136 | SAMN04488027_10138 | Putative hemolysin. | Adenylate cyclase. | 0.747 |
SDG38395.1 | mscL | SAMN04488027_10136 | SAMN04488027_10135 | Putative hemolysin. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.541 |
SDG38415.1 | SDG38395.1 | SAMN04488027_10137 | SAMN04488027_10136 | Histidine triad (HIT) family protein. | Putative hemolysin. | 0.753 |
SDG38415.1 | SDG38438.1 | SAMN04488027_10137 | SAMN04488027_10138 | Histidine triad (HIT) family protein. | Adenylate cyclase. | 0.775 |
SDG38415.1 | mscL | SAMN04488027_10137 | SAMN04488027_10135 | Histidine triad (HIT) family protein. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.532 |
SDG38438.1 | SDG38395.1 | SAMN04488027_10138 | SAMN04488027_10136 | Adenylate cyclase. | Putative hemolysin. | 0.747 |
SDG38438.1 | SDG38415.1 | SAMN04488027_10138 | SAMN04488027_10137 | Adenylate cyclase. | Histidine triad (HIT) family protein. | 0.775 |
SDG38438.1 | SDG75080.1 | SAMN04488027_10138 | SAMN04488027_106111 | Adenylate cyclase. | PAS/PAC sensor hybrid histidine kinase. | 0.909 |
SDG38438.1 | SDG81771.1 | SAMN04488027_10138 | SAMN04488027_10819 | Adenylate cyclase. | PAS domain S-box-containing protein. | 0.856 |
SDG38438.1 | SDG81891.1 | SAMN04488027_10138 | SAMN04488027_10825 | Adenylate cyclase. | PAS domain S-box-containing protein. | 0.856 |
SDG38438.1 | SDG83978.1 | SAMN04488027_10138 | SAMN04488027_108137 | Adenylate cyclase. | PAS domain S-box-containing protein. | 0.871 |
SDG38438.1 | mscL | SAMN04488027_10138 | SAMN04488027_10135 | Adenylate cyclase. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.523 |
SDG75080.1 | SDG38438.1 | SAMN04488027_106111 | SAMN04488027_10138 | PAS/PAC sensor hybrid histidine kinase. | Adenylate cyclase. | 0.909 |
SDG75080.1 | SDG81771.1 | SAMN04488027_106111 | SAMN04488027_10819 | PAS/PAC sensor hybrid histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDG75080.1 | SDG81891.1 | SAMN04488027_106111 | SAMN04488027_10825 | PAS/PAC sensor hybrid histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDG75080.1 | SDG83978.1 | SAMN04488027_106111 | SAMN04488027_108137 | PAS/PAC sensor hybrid histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDG75080.1 | mscL | SAMN04488027_106111 | SAMN04488027_10135 | PAS/PAC sensor hybrid histidine kinase. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.403 |
SDG81771.1 | SDG38438.1 | SAMN04488027_10819 | SAMN04488027_10138 | PAS domain S-box-containing protein. | Adenylate cyclase. | 0.856 |
SDG81771.1 | SDG75080.1 | SAMN04488027_10819 | SAMN04488027_106111 | PAS domain S-box-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
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