Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG37947.1 | SDG37976.1 | SAMN04488027_10115 | SAMN04488027_10116 | YceI-like domain-containing protein. | Hypothetical protein. | 0.930 |
SDG37947.1 | SDG58519.1 | SAMN04488027_10115 | SAMN04488027_103282 | YceI-like domain-containing protein. | Hypothetical protein. | 0.495 |
SDG37947.1 | SDG58538.1 | SAMN04488027_10115 | SAMN04488027_103283 | YceI-like domain-containing protein. | Protein of unknown function. | 0.434 |
SDG37976.1 | SDG37947.1 | SAMN04488027_10116 | SAMN04488027_10115 | Hypothetical protein. | YceI-like domain-containing protein. | 0.930 |
SDG37976.1 | SDG58519.1 | SAMN04488027_10116 | SAMN04488027_103282 | Hypothetical protein. | Hypothetical protein. | 0.463 |
SDG58493.1 | SDG58519.1 | SAMN04488027_103281 | SAMN04488027_103282 | Phospholipase A1. | Hypothetical protein. | 0.515 |
SDG58493.1 | SDG58538.1 | SAMN04488027_103281 | SAMN04488027_103283 | Phospholipase A1. | Protein of unknown function. | 0.515 |
SDG58493.1 | SDG58556.1 | SAMN04488027_103281 | SAMN04488027_103284 | Phospholipase A1. | Carboxymethylenebutenolidase. | 0.415 |
SDG58519.1 | SDG37947.1 | SAMN04488027_103282 | SAMN04488027_10115 | Hypothetical protein. | YceI-like domain-containing protein. | 0.495 |
SDG58519.1 | SDG37976.1 | SAMN04488027_103282 | SAMN04488027_10116 | Hypothetical protein. | Hypothetical protein. | 0.463 |
SDG58519.1 | SDG58493.1 | SAMN04488027_103282 | SAMN04488027_103281 | Hypothetical protein. | Phospholipase A1. | 0.515 |
SDG58519.1 | SDG58538.1 | SAMN04488027_103282 | SAMN04488027_103283 | Hypothetical protein. | Protein of unknown function. | 0.959 |
SDG58519.1 | SDG58556.1 | SAMN04488027_103282 | SAMN04488027_103284 | Hypothetical protein. | Carboxymethylenebutenolidase. | 0.605 |
SDG58519.1 | SDG61937.1 | SAMN04488027_103282 | SAMN04488027_10462 | Hypothetical protein. | RNA polymerase Rpb6. | 0.525 |
SDG58519.1 | SDG90333.1 | SAMN04488027_103282 | SAMN04488027_11079 | Hypothetical protein. | Anti-sigma-K factor rskA. | 0.469 |
SDG58519.1 | rpoA | SAMN04488027_103282 | SAMN04488027_101255 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.525 |
SDG58519.1 | rpoB | SAMN04488027_103282 | SAMN04488027_105235 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.573 |
SDG58519.1 | rpoC | SAMN04488027_103282 | SAMN04488027_105234 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.588 |
SDG58538.1 | SDG37947.1 | SAMN04488027_103283 | SAMN04488027_10115 | Protein of unknown function. | YceI-like domain-containing protein. | 0.434 |
SDG58538.1 | SDG58493.1 | SAMN04488027_103283 | SAMN04488027_103281 | Protein of unknown function. | Phospholipase A1. | 0.515 |
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