STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG71081.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
SDG71064.1
Lipopolysaccharide export system ATP-binding protein.
       0.780
SDG78077.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.768
SDG50467.1
Hypothetical protein.
  
     0.747
SDG71095.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.745
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
       0.745
SDG61980.1
Hypothetical protein.
  
     0.683
SDG69808.1
Hypothetical protein.
  
     0.682
SDG55759.1
CarboxypepD_reg-like domain-containing protein.
  
     0.681
SDG89621.1
Hypothetical protein.
  
     0.681
SDG47819.1
AhpC/TSA family protein.
  
     0.669
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.