STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG71566.1Hypothetical protein. (388 aa)    
Predicted Functional Partners:
SDG69953.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.980
SDG69930.1
Electron transfer flavoprotein beta subunit.
 
 
 0.955
SDH02367.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.938
SDG48056.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.888
SDG75390.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.872
SDH02342.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.872
SDG63385.1
3-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.793
SDG63318.1
methylglutaconyl-CoA hydratase.
  
  0.788
SDG74840.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.787
SDG63332.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 0.782
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.