STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG67110.1Nitrous oxidase accessory protein. (317 aa)    
Predicted Functional Partners:
SDG67092.1
Copper chaperone NosL.
 
 
 0.995
SDG67065.1
Hypothetical protein.
 
 
 0.991
SDG67143.1
Cu-processing system permease protein.
 
 
 0.970
SDG67123.1
Cu-processing system ATP-binding protein.
 
 
 0.939
SDG67053.1
Cytochrome C oxidase subunit II, periplasmic domain.
 
  
 0.934
SDH07356.1
Nitrous oxide reductase apoprotein.
 
  
 0.860
SDH07316.1
Putative heme-binding domain-containing protein.
 
     0.779
SDG54650.1
Protein involved in gliding motility GldF.
  
 
 0.745
SDG95824.1
ABC-2 type transport system permease protein.
  
 
 0.745
SDG67166.1
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
     0.732
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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