STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG75141.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
SDG75154.1
Hypothetical protein.
 
     0.956
SDG80084.1
Hypothetical protein.
  
     0.740
SDG63961.1
Hypothetical protein.
  
     0.738
SDG41422.1
Protein of unknown function.
  
     0.708
SDG83317.1
Hypothetical protein.
  
     0.697
SDG92411.1
Hypothetical protein.
  
     0.692
SDG53413.1
Hypothetical protein.
  
     0.688
SDG62320.1
Hypothetical protein.
  
     0.688
SDG54866.1
Acyl CoA binding protein.
  
     0.679
SDG49436.1
Hypothetical protein.
  
     0.663
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.