STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG75267.1Gliding motility-associated C-terminal domain-containing protein. (2343 aa)    
Predicted Functional Partners:
SDG75289.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.909
SDG71663.1
Lysophospholipase L1.
  
 
  0.590
SDH06235.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.562
SDH02231.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.553
SDG73724.1
Iron complex outermembrane recepter protein.
  
 
   0.544
SDG39031.1
Hypothetical protein.
    
   0.539
SDG73758.1
SusE outer membrane protein.
  
 
  0.539
SDG75307.1
Hemolysin III.
       0.497
SDG92129.1
Hypothetical protein.
  
 
   0.487
SDG67670.1
Iron complex outermembrane recepter protein.
  
 
   0.486
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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