STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG74111.1NAD(P)H-dependent FMN reductase. (175 aa)    
Predicted Functional Partners:
SDG74128.1
Para-aminobenzoate synthetase component 1.
       0.780
SDG55603.1
NAD(P)H-dependent FMN reductase.
  
     0.772
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
     
 0.713
SDG74162.1
Thiol:disulfide interchange protein DsbD.
       0.706
SDH01168.1
NMT1/THI5 like.
  
 
  0.606
SDG74092.1
Hypothetical protein.
       0.541
SDG57334.1
Glyoxylase, beta-lactamase superfamily II.
     
 0.482
SDG97354.1
Glyoxylase, beta-lactamase superfamily II.
     
 0.482
SDG39389.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
 
  
 0.478
SDG95535.1
Succinate dehydrogenase subunit A.
    
 0.403
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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