STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH07356.1Nitrous oxide reductase apoprotein. (298 aa)    
Predicted Functional Partners:
SDG67053.1
Cytochrome C oxidase subunit II, periplasmic domain.
 
     0.976
SDH07316.1
Putative heme-binding domain-containing protein.
 
 
  0.938
SDG67143.1
Cu-processing system permease protein.
 
 
 0.906
SDG67123.1
Cu-processing system ATP-binding protein.
 
 
 0.877
SDG67110.1
Nitrous oxidase accessory protein.
 
  
 0.860
SDG67092.1
Copper chaperone NosL.
 
  
 0.834
SDG67065.1
Hypothetical protein.
 
  
 0.819
SDG67176.1
Hypothetical protein.
 
 
 0.731
SDH07335.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
       0.728
SDG67166.1
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
    0.666
Your Current Organism:
Psychroflexus sediminis
NCBI taxonomy Id: 470826
Other names: CCTCC AA 207030, DSM 19803, KCTC 22166, P. sediminis, Psychroflexus sediminis Chen et al. 2009, Psychroflexus sp. YIM C238, YIM C238
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