STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB04324.13-phytase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)    
Predicted Functional Partners:
KKB03021.1
FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.
    
  0.873
KKB04325.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.815
KKB04105.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.677
KKB06198.1
Phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
  
     0.631
araC
Positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.589
KKB04970.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
KKB03812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
KKB05042.1
Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
KKB05282.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
KKB03438.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
Your Current Organism:
Pantoea anthophila
NCBI taxonomy Id: 470931
Other names: LMG 2558, LMG:2558, P. anthophila, Pantoea anthophila Brady et al. 2009, Pantoea sp. LMG 2558, Pantoea sp. LMG 2560, strain BD 871
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.