Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKB04384.1 | KKB04385.1 | TN98_06510 | TN98_06515 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PriC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
KKB04384.1 | KKB04386.1 | TN98_06510 | TN98_06520 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
KKB04385.1 | KKB04384.1 | TN98_06515 | TN98_06510 | PriC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
KKB04385.1 | KKB04386.1 | TN98_06515 | TN98_06520 | PriC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
KKB04386.1 | KKB04384.1 | TN98_06520 | TN98_06510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
KKB04386.1 | KKB04385.1 | TN98_06520 | TN98_06515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PriC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
KKB04386.1 | apt | TN98_06520 | TN98_06525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.541 |
KKB04386.1 | cydC | TN98_06520 | TN98_08025 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter permease; In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
KKB04386.1 | exbB | TN98_06520 | TN98_16870 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biopolymer transporter ExbB; Membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |
apt | KKB04386.1 | TN98_06525 | TN98_06520 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
cydC | KKB04386.1 | TN98_08025 | TN98_06520 | Amino acid ABC transporter permease; In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
exbB | KKB04386.1 | TN98_16870 | TN98_06520 | Biopolymer transporter ExbB; Membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |