Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKB05415.1 | mdtI | TN98_12070 | TN98_12065 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug transporter; Catalyzes the excretion of spermidine. | 0.444 |
KKB05415.1 | mdtJ | TN98_12070 | TN98_12060 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug transporter; Catalyzes the excretion of spermidine. | 0.444 |
arnF | mdtI | TN98_19980 | TN98_12065 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. | Multidrug transporter; Catalyzes the excretion of spermidine. | 0.534 |
arnF | mdtJ | TN98_19980 | TN98_12060 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. | Multidrug transporter; Catalyzes the excretion of spermidine. | 0.534 |
mdtI | KKB05415.1 | TN98_12065 | TN98_12070 | Multidrug transporter; Catalyzes the excretion of spermidine. | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
mdtI | arnF | TN98_12065 | TN98_19980 | Multidrug transporter; Catalyzes the excretion of spermidine. | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. | 0.534 |
mdtI | mdtJ | TN98_12065 | TN98_12060 | Multidrug transporter; Catalyzes the excretion of spermidine. | Multidrug transporter; Catalyzes the excretion of spermidine. | 0.985 |
mdtJ | KKB05415.1 | TN98_12060 | TN98_12070 | Multidrug transporter; Catalyzes the excretion of spermidine. | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
mdtJ | arnF | TN98_12060 | TN98_19980 | Multidrug transporter; Catalyzes the excretion of spermidine. | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. | 0.534 |
mdtJ | mdtI | TN98_12060 | TN98_12065 | Multidrug transporter; Catalyzes the excretion of spermidine. | Multidrug transporter; Catalyzes the excretion of spermidine. | 0.985 |