STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB04081.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (263 aa)    
Predicted Functional Partners:
KKB03703.1
Amino acid ABC transporter permease; With HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.989
KKB03702.1
Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.988
hisP
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.986
KKB05232.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.953
glnP
Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.911
tcyL
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.898
KKB05873.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.858
KKB03114.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.845
KKB04605.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.834
KKB03260.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.834
Your Current Organism:
Pantoea anthophila
NCBI taxonomy Id: 470931
Other names: LMG 2558, LMG:2558, P. anthophila, Pantoea anthophila Brady et al. 2009, Pantoea sp. LMG 2558, Pantoea sp. LMG 2560, strain BD 871
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.