Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKB04136.1 | KKB04137.1 | TN98_13820 | TN98_13825 | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
KKB04136.1 | KKB05656.1 | TN98_13820 | TN98_03420 | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | LrgB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
KKB04136.1 | bioA | TN98_13820 | TN98_07390 | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.640 |
KKB04136.1 | cdd | TN98_13820 | TN98_13830 | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 0.560 |
KKB04136.1 | metG | TN98_13820 | TN98_13815 | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.566 |
KKB04137.1 | KKB04136.1 | TN98_13825 | TN98_13820 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
KKB04137.1 | cdd | TN98_13825 | TN98_13830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 0.531 |
KKB04137.1 | metG | TN98_13825 | TN98_13815 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.530 |
KKB05656.1 | KKB04136.1 | TN98_03420 | TN98_13820 | LrgB; Derived by automated computational analysis using gene prediction method: Protein Homology. | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
bioA | KKB04136.1 | TN98_07390 | TN98_13820 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
cdd | KKB04136.1 | TN98_13830 | TN98_13820 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.560 |
cdd | KKB04137.1 | TN98_13830 | TN98_13825 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.531 |
cdd | metG | TN98_13830 | TN98_13815 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.583 |
metG | KKB04136.1 | TN98_13815 | TN98_13820 | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.566 |
metG | KKB04137.1 | TN98_13815 | TN98_13825 | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.530 |
metG | cdd | TN98_13815 | TN98_13830 | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 0.583 |