STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQZ80477.1long-chain-acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)    
Predicted Functional Partners:
AQZ83160.1
2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
AQZ80241.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
AQZ83158.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.907
AQZ82405.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.884
rne
Ribonuclease E/G; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
       0.713
AQZ80377.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.632
AQZ83059.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.617
AQZ81194.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.607
AQZ80440.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
AQZ83161.1
Terpene utilization protein AtuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.538
Your Current Organism:
Acinetobacter calcoaceticus
NCBI taxonomy Id: 471
Other names: A. calcoaceticus, ATCC 23055, Acinetobacter genomosp. 1, Acinetobacter genomospecies 1, Acinetobacter sp. AV6, Acinetobacter sp. HNR, Acinetobacter sp. STB1, CAIM 17, CCUG 12804, CIP 81.8, DSM 30006, JCM 6842, Micrococcus calcoaceticus, Moraxella calcoacetica, NCCB 22016, NCTC 12983, Neisseria winogradskyi
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