STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQZ81430.1N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)    
Predicted Functional Partners:
AQZ80889.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.527
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.475
AQZ81429.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
AQZ83167.1
Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.420
AQZ83052.1
VOC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.412
AQZ81701.1
Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.402
Your Current Organism:
Acinetobacter calcoaceticus
NCBI taxonomy Id: 471
Other names: A. calcoaceticus, ATCC 23055, Acinetobacter genomosp. 1, Acinetobacter genomospecies 1, Acinetobacter sp. AV6, Acinetobacter sp. HNR, Acinetobacter sp. STB1, CAIM 17, CCUG 12804, CIP 81.8, DSM 30006, JCM 6842, Micrococcus calcoaceticus, Moraxella calcoacetica, NCCB 22016, NCTC 12983, Neisseria winogradskyi
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.