STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS24297.1PFAM: Aldehyde Dehydrogenase; KEGG: gka:GK1919 aldehyde dehydrogenase. (479 aa)    
Predicted Functional Partners:
ACS25615.1
PFAM: Proline dehydrogenase; KEGG: gka:GK3010 proline dehydrogenase.
 
 
 0.888
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.829
ACS24298.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gka:GK1914 enoyl-CoA hydratase.
  
   0.554
ACS24296.1
Hypothetical protein.
       0.553
ACS23283.1
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: gka:GK0359 dehydrogenase.
   
  
 0.456
ACS25822.1
PFAM: oxidoreductase domain protein; KEGG: gka:GK3220 hypothetical protein.
   
  
 0.456
ACS24906.1
KEGG: gka:GK2247 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein.
  
 
 0.412
ACS23578.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: gtn:GTNG_0603 fumarylacetoacetate hydrolase family protein.
  
 
 0.402
ACS23395.1
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; glutamate synthase; KEGG: afl:Aflv_0362 glutamate synthase large subunit.
  
  
 0.401
ACS24190.1
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: gka:GK1431 glutamate synthaselarge subunit.
  
  
 0.401
Your Current Organism:
Geobacillus sp. WCH70
NCBI taxonomy Id: 471223
Other names: G. sp. WCH70
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