STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_16819Transmembrane channel-like protein 3. (1120 aa)    
Predicted Functional Partners:
ALC57_13531
Calcium and integrin-binding protein 1.
    
 0.986
ALC57_03333
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.915
ALC57_12342
Lipoma HMGIC fusion partner-like 4 protein.
   
 
 0.836
ALC57_05028
Muscle M-line assembly protein unc-89.
   
 0.819
ALC57_09858
Titin.
   
 0.784
ALC57_00073
Titin.
   
 0.784
ALC57_14129
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.761
ALC57_14182
Phosphatidate phosphatase PPAPDC1A.
    
 0.730
ALC57_16053
E3 ubiquitin-protein ligase MIB2.
   
 0.727
ALC57_09517
E3 ubiquitin-protein ligase mind-bomb.
   
 0.727
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.