Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_16163Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
ALC57_06835
PHD finger protein 20-like protein 1.
    
  0.492
ALC57_12647
Protein lin-52 like protein.
    
 0.486
ALC57_04106
Protein lin-54 like protein.
    
 0.483
ALC57_06914
Putative histone-binding protein Caf1.
    
  0.468
ALC57_06747
Retinoblastoma-like protein 1.
    
  0.456
ALC57_06046
Protein lin-9 like protein.
    
 0.438
ALC57_12212
Transcription factor E2F5.
    
  0.436
ALC57_07484
Xylosyltransferase oxt.
    
  0.434
ALC57_14197
Uncharacterized protein.
  
     0.418
ALC57_15224
Replication protein A 32 kDa subunit.
    
 0.417
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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